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ivis

On the record

Compute options
The Python installation page documents CPU installation and a GPU option for users with CUDA installed.beringresearch.github.io · read 11 Oct 2026
Dashboard type
interactiveberingresearch.github.io · read 23 Sep 2026
Data inputs
The library supports arbitrary datasets, including N-dimensional arrays, image files on disk, and custom data connectors.beringresearch.github.io · read 12 Oct 2026
Dependencies
The Python package documentation lists Python 3.5+, TensorFlow, NumPy, tqdm, and Annoy as dependencies.beringresearch.github.io · read 12 Oct 2026
Embeddings
It preserves global data structures in a low-dimensional space and can add new data points to existing embeddings using a parametric mapping function.beringresearch.github.io · read 11 Oct 2026
Input data
The documentation lists N-dimensional arrays, image files on disk, and custom data connectors; the repository README also lists NumPy arrays, sparse matrices, and HDF5 files.beringresearch.github.io · read 11 Oct 2026
Integration example
A single-cell analysis example uses Scanpy for data import, preprocessing, and normalization before applying ivis.beringresearch.github.io · read 11 Oct 2026
Integrations
The documentation lists callbacks and TensorBoard integration.beringresearch.github.io · read 12 Oct 2026
Large-data workflow
For out-of-memory training, the docs demonstrate training from HDF5 files and describe custom dataset loaders for other storage, including databases.beringresearch.github.io · read 11 Oct 2026
Learning modes
ivis supports unsupervised, semi-supervised, and fully supervised dimensionality reduction.beringresearch.github.io · read 12 Oct 2026
License
The GitHub repository identifies its license as Apache-2.0.github.com · read 11 Oct 2026
Maker
The repository credits Bering Limited; the maker's site lists its address as 54 Portland Place, London, United Kingdom.beringresearch.com · read 11 Oct 2026
New data
A parametric mapping function can add new data points to existing embeddings.beringresearch.github.io · read 12 Oct 2026
Platform
webberingresearch.github.io · read 23 Sep 2026
Processing
ivis supports in-memory and out-of-memory data processing.beringresearch.github.io · read 12 Oct 2026
Purpose
ivis is a machine learning library for reducing the dimensionality of very large datasets using Siamese Neural Networks.beringresearch.github.io · read 12 Oct 2026
Python and R
The documentation provides Python and R package sections, and Python installation instructions use pip.beringresearch.github.io · read 11 Oct 2026
Python installation
The documentation provides CPU and GPU installation options through pip; the GPU option is for users with CUDA installed.beringresearch.github.io · read 12 Oct 2026

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